max planck institut
informatik

topGO Methods

The topGO package have been developed to work with the graph structure of the GO. At the moment the package implements two algorithms which use the graph structure: elim and weight.

Useful documents:

• Slides on Group Testing (2007)


• Slides on GO testing (2006)


• Integrating the GO graph structure in scoring the significance of Gene Ontology terms
  Master thesis, March 2005

• Algorithms & Complexity
• Computer Vision and Machine Learning
• Internet Architecture
• Computer Graphics
• Databases and Information Systems
• Research Group Computational Biology
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